CDS

Accession Number TCMCG005C24044
gbkey CDS
Protein Id XP_020275032.1
Location complement(join(54522182..54522256,54524150..54524221,54524311..54524373,54524570..54524675,54524879..54524973,54525399..54525428,54530594..54530665,54531034..54531093,54531158..54531204,54532390..54532454,54532765..54532853,54532945..54532983,54533108..54533167,54536877..54536949,54538529..54538695,54546095..54546175,54547873..54548004,54548112..54548209,54549650..54549770,54550936..54551080,54552434..54552617,54556707..54556792,54559110..54559258,54559347..54559391))
Gene LOC109849593
GeneID 109849593
Organism Asparagus officinalis

Protein

Length 717aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA376608;
db_source XM_020419443.1
Definition U3 small nucleolar RNA-associated protein 25-like isoform X2

EGGNOG-MAPPER Annotation

COG_category K
Description Utp25, U3 small nucleolar RNA-associated SSU processome protein 25
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14774        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000462        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0019843        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030515        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032040        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034511        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCCGTGTACCGCCTCAAAGAATCCCTTCAGGCTTTCTCCAAGTCCTTTGAAACCGGAGACATCGCCGAATCCGACGAGGCGGTTGCCGGCGTGGCGTCGTCCTCGATTCCATCGGCGAAGCGCCGCCGCCTGATGCCGAGGATGTTCTCGTCGAGATCGATCGATTTCTTTCATCACAAGAATCCAATCCGACGAAGGGAGCAAAAAGGCTTAGAGGAAGAAGAAGAAGATGAAGAAGATGGTGATCAATATTCTATGTTTGACGGGGAAAATGGTGGCTCGGACAGGGAACCTATGGATGATTCTGAAGGTGAATATCTCAGGCGATGCGAGCATTCTCAAATTATGAAGCAGAGAGAGGAACATGAAACTGGAGACAAAGATGCTGCTTCTAGCGGGGATGATACAAATGGTTCTGAAAATGATAGCCATACAAATGTTGATGAAATAGCTAGCATATGTTCTTTCCATCGTCACCTGGAGGACATTCTAACAGTTGAACATGCTGGTGAGTTGACAAAATCTATATGGAAATATAAGTGGGAAATGCCTGCAACTGGCAGATCAATGTCGAAGTGGATGGGAACAGGCGAACGCTTGTCAATGGAAGTTAGCAATGACTCGGTGTATGGGGTCAAGCAAAAACTCTACAAGCATTGGCTAGACATCTTCAAGGCATCTGATTTTGCAGATTTAGATCCTCAGTTGACATTCTTCTTTTCACTTTGCCATAGCTATCGTGATATAATGCATTGTAACAAAAAGCCATTTTATCTTAAAGGTGAGGAGGATTCAGTTATCATGGACGCGTACCTTATGCATGCTTTAGATCATGTTTTTAAGACGAGGGATCTTGTGAGCAAGAATAATGCAAAAATTAGCACGGATCCAGATGGTAAAATGGATGAGATTCTTAGTGCAAGCAATTTCCTTGATCATGGTTTTACACGTCCCAAGGTGATGTTTTTGCTGCCACTTGGAAGCATCGCATTACGTGTTGTCAAAAGGCTAATTCAACTTATTCCAACATCAAATAAAACCAATATAGAGCACATGGATCGCTTATTAAAGGAGTTTGGAACTGATGACACTGAAGAAGAAGACAAGGATTCGAAAACTAAAAAACCTGCGAAGCCTAAAGACTTTCAACGTCTGTTTGGTGGAAACAACAATGATCACTTTATGATAGGCATAAAGATAACGAAGAAAAGCATAAAATTCTACCATGATTTTTATACATCAGATATCATTATAGCATCACCTCTTGGATTGATCACTAAAATTGGAGAAGCAGAGGCAGAAAAGGCAAAGGATGTTGATTATCTATCGTCAATAGAGCTTTTGATCATTGATCATACAGACGTGATAGCAATGCAGAATTTGTCCCATTTGAATACTGTAGTTGAGCAACTGAATCATATGCCTTCTAAACAACATCAAACTGATGTCATGCGCATTAGGCAATGGTATCTAAATGGGCATGCACGCTTTTATCGACAAACAATACTGTTAGGTGCTTTTCTTAGCCCAGATATGAATGCCCTTTTCAATCGGTCCTGTATGAATTATGAGGGGAAGGTGAAATTGGTGAATGAGTATAAAGGTGTCCTTCCTAAAGTGCTACTTCAAGTGAAGCAGGTGTATCAGCGTTTTGATGCTTCTTCAATTGTTGATGTTGATGATGCACGTCTTGATTACTTTTCTAGTAAGGTGTTTCCTAAAATAAAGGATTCAGCGGAGGGAGGCATCATGTTATTTGTCAGTTCCTATTTTGAATACGTGAGAGTTCGGAATTTCTTAACATCTCAGAATGCTTCCTTCTGCTTATTTGGAGATTATGCAGAGCCACGTGATATATCTCGTGCACGTGTGTGGTTTTTTGAGGGCAAGCGGAAGATCATACTTTACACCGAAAGAGCTCATTTTTATCGTAGATACAAGATTCGTGGAATAAATAATTTATTTATCTACTCTCTACCTGAAAGAAAAGAATTCTACCCTGAGATAATTAATATGCTAGAAGGATCAAACAACTTGACGTGCAATGTGCTCTTTTCACGCTTTGATCATCTTCGGCTGGAGAGAGTCGTTGGGACTGGAGCTGCCAAGAGGATGGTGTCCTCTGATAAGAAGACCTTTGTTTTTGCCTGA
Protein:  
MSVYRLKESLQAFSKSFETGDIAESDEAVAGVASSSIPSAKRRRLMPRMFSSRSIDFFHHKNPIRRREQKGLEEEEEDEEDGDQYSMFDGENGGSDREPMDDSEGEYLRRCEHSQIMKQREEHETGDKDAASSGDDTNGSENDSHTNVDEIASICSFHRHLEDILTVEHAGELTKSIWKYKWEMPATGRSMSKWMGTGERLSMEVSNDSVYGVKQKLYKHWLDIFKASDFADLDPQLTFFFSLCHSYRDIMHCNKKPFYLKGEEDSVIMDAYLMHALDHVFKTRDLVSKNNAKISTDPDGKMDEILSASNFLDHGFTRPKVMFLLPLGSIALRVVKRLIQLIPTSNKTNIEHMDRLLKEFGTDDTEEEDKDSKTKKPAKPKDFQRLFGGNNNDHFMIGIKITKKSIKFYHDFYTSDIIIASPLGLITKIGEAEAEKAKDVDYLSSIELLIIDHTDVIAMQNLSHLNTVVEQLNHMPSKQHQTDVMRIRQWYLNGHARFYRQTILLGAFLSPDMNALFNRSCMNYEGKVKLVNEYKGVLPKVLLQVKQVYQRFDASSIVDVDDARLDYFSSKVFPKIKDSAEGGIMLFVSSYFEYVRVRNFLTSQNASFCLFGDYAEPRDISRARVWFFEGKRKIILYTERAHFYRRYKIRGINNLFIYSLPERKEFYPEIINMLEGSNNLTCNVLFSRFDHLRLERVVGTGAAKRMVSSDKKTFVFA